rs46327569 SNP Detail

Summary

• ID
  rs46327569
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:79211143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAGATGAT CTGAGGTCAC
  CTCAAAGAGC TCTAGGTATC TCAAAATTTC TTGACAAACT TCCCTCCCTT CCTTCCCCCT
  TCCTACCCAC CTTTCCTGTC ATTTATTTGT GAGATCTGAT AAGAGCAGAA AGCTGACCAA
  CAACTTCCCT TACCTGCTCA ATGACAACAA GATGCTTTCA AAATTCCAAG GTTTCCAGGA
  M
  CATAGAGTTG ACACTCACTT GCTCTTCTGC CTCTAGCTAC TGAGGTCAAA AATGGAGCAA
  AGGTTTACTG AATATATTTC TGAATGACCA GGTTGGCCTC GAACTCACAG AGATCCACAT
  GACTGCCTCT TTCAAACTTC CAGGACCAAT CTTTCCTGGG CATAGATGCC TTCTAAGCCT
  TCCTTTCACC TTTTTCCTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss52474199	NES15653485	PERLEGEN	MM_PANEL2	f	SNP	A	C	A	C
SNP Consensus Information
SNP					Consensus Type	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs46327569					SNP	A	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52474199	NES15653485	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:79211143 () rs orientation: forward

Symbol	Name	Function Class
Gm2225	predicted gene 2225	1520 bp downstream