rs46328516 SNP Detail

Summary

• ID
  rs46328516
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:107426009 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGTG AGCTGGGCCC TCAGAGTCCT
  S
  AGCCGAGAAA GATAGCTAAC AGCCA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136948260	ENSMUSSNP72685	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
ss323191571	CHEV_9_107451141	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46328516					SNP	C	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:107426009 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22291	CpG island 22291	1351 bp distal
Gm34106	predicted gene, 34106	within coordinates
Rr401661	regulatory region 401661	1461 bp downstream
Rr686534	regulatory region 686534	1502 bp distal
Tssr86983	transcription start site region 86983	1431 bp downstream
Tssr86984	transcription start site region 86984	1960 bp upstream
Zmynd10	zinc finger, MYND domain containing 10	within coordinates