rs46329448 SNP Detail

Summary

• ID
  rs46329448
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67061272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAATAGTC CAGATCACAA
  ATATTGCTGT GGTTAGGAGG AGTGTGCCAG GCCCAAATCT CTTTTCTACA AGTTGCTGGG
  TGTGTGGTTT TTCACAAGTC ATTGGACTTT TGGGCTCTTT TCTCCTCTTC TCTTTCCATG
  TGTGTCTGCG TGCAGCCTCC ATAAAGGTCA GAGGTCAACT TGGGGTCATT CCTCAAAAGC
  Y
  CTTCATCTTG TTTGTTTGTT TGTTTGTTTT TTGAGACAGG GTCTTTCACT GGCCTGAGGA
  TCCCCGATTT AGTAAGGCTA GTTGGCCAGC AGCAAGCCAC GGGGATCCTC CTGTCTCTGC
  CCCCTGGTGC CAGGATTACA GGTGTGCTCT ACCTTGCCTG GCTTTTTAAA TGGACTCTGG
  GATCAAACTC ATGCTCGCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136578017	ENSMUSSNP4305386	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46329448					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67061272 () rs orientation: forward

Symbol	Name	Function Class
D9Dcr5	DNA segment, Chr 9, Derry C. Roopenian 5	1575 bp proximal
D9Mit302	DNA Segment, Chr 9, Massachusetts Institute of Technology 302	1572 bp proximal
D9Mit302.1	DNA segment, Chr 9, Massachusetts Institute of Technology 302.1	1351 bp proximal
Gm19299	predicted gene, 19299	within coordinates
Gm68695	predicted gene, 68695	within coordinates
Rr681887	regulatory region 681887	300 bp distal
Rr681888	regulatory region 681888	114 bp proximal
Tssr90326	transcription start site region 90326	1229 bp downstream
Tssr90327	transcription start site region 90327	1256 bp downstream