rs46330386 SNP Detail

Summary

• ID
  rs46330386
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:144575698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGCT GAACTCCAGC TAAGACAGCT
  G
  CTGGTGGCAT AGGCCAGCAT TCCTG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss144618755	ENSMUSSNP2811075	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
ss321711309	CHEV_5_145399757	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46330386					SNP	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144575698 () rs orientation: forward

Symbol	Name	Function Class
D5Dcr36	DNA Segment, Chr 5, Derry C. Roopenian 36	1585 bp proximal
D5Mit43	DNA segment, Chr 5, Massachusetts Institute of Technology 43	1540 bp proximal
D5Mit43.2	DNA segment, Chr 5, Massachusetts Institute of Technology 43.2	1647 bp proximal
Gm71822	predicted gene, 71822	within coordinates
Rr624456	regulatory region 624456	within coordinates
Rr624457	regulatory region 624457	40 bp distal