rs46330688 SNP Detail

Summary

• ID
  rs46330688
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137724769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCA GCCAGGCGGT GGTGGCGCAC
  R
  CCTTTAATCC CAGCCCTTGG GAGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss147628474	ENSMUSSNP548969	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss321369541	CHEV_4_137553373	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46330688					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137724769 () rs orientation: forward

Symbol	Name	Function Class
Eif4g3	eukaryotic translation initiation factor 4 gamma, 3	within coordinates
Rr86598	regulatory region 86598	32 bp proximal
Rr100351	regulatory region 100351	768 bp distal
Tssr39811	transcription start site region 39811	1621 bp downstream