rs46331662 SNP Detail

Summary

• ID
  rs46331662
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185416716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCTCATGTA TTTGGCTGGC CTAGGTGGCC ACCGAGCCCC
  AACGAGCCTC TTGGCTTGAC CTTCTAGTGC TGGGATGACA GGTACAAGCC GTGCCGTGAG
  G
  CTTGCCTTTC ACATGAGTGT TGGAGATCTA AGCACAGGTC TCCGTGCTGG TTTGGAGAGC
  ACCTTATTCA CTGAGCCATC TCCTTGGGCC TCTCACATA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss146440068	ENSMUSSNP2449664	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320178630	CHEV_1_187508398	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs46331662					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185416716 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	1959 bp distal
Rr425422	regulatory region 425422	279 bp proximal
Rr425423	regulatory region 425423	467 bp proximal