rs46338887 SNP Detail

Summary

• ID
  rs46338887
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:122671861 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGG GCAAAGTCCC TGTCCCCTGT
  G
  GTATTGACCC TGTGTTGGGG ACATG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322846801	CHEV_8_124469022	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46338887					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122671861 () rs orientation: forward

Symbol	Name	Function Class
Car5a	carbonic anhydrase 5a, mitochondrial	210 bp upstream
Gm37497	predicted gene, 37497	1928 bp downstream
Rr671979	regulatory region 671979	1753 bp distal
Rr671980	regulatory region 671980	within coordinates
Tssr83252	transcription start site region 83252	242 bp upstream
Tssr83253	transcription start site region 83253	214 bp upstream