rs46341433 SNP Detail

Summary

• ID
  rs46341433
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171487366 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTA ACAAAGCTTC TTTGGTGACA
  R
  GAGATGGCCA GATGGGACTC AGTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss120001861	PARCsnp_1.15008	PARC_SEQ	INBRED	f	SNP			G	A
ss120004157	PARCsnp_1.04347	PARC_SEQ	INBRED	f	SNP			G	A
ss146171827	ENSMUSSNP6942074	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss320120223	CHEV_1_173589929	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs46341433					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171487366 () rs orientation: forward

Symbol	Name	Function Class
Gm70589	predicted gene, 70589	495 bp downstream
Rr423376	regulatory region 423376	832 bp distal
Rr423377	regulatory region 423377	870 bp distal