rs46345628 SNP Detail

Summary

• ID
  rs46345628
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143971923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATTCTAGC TATAAGGTCA
  CCAAGGTGCT GCAATGCTAT GACTTATTTC TTCTCACCTC TGCTTTACTC TGCATTGGTT
  TTAGTTGAGG CAGAGAGTCT CATCCTGTGT AGGACAGGAA GCTACCAGCA GCTTCAAGTG
  TACAAGGACC TTTTTTTACC AAGGAAACCT AGAAAAACAG ATACCCTTGT GGTTCCCAGA
  R
  AGCATTCAAT TCCTCAAAAG GACTCTTAAG ATCTTCTTGG GTCACTTGTT GACTACAGGG
  CCTCGTTATT TGATTGACAG CCCTACTAGA GTCTCAAGGA ATGTGAGAAG GGCAGATCAC
  AAAGGAAAAG ACCTTTTACC AGAATTTTTA AAAAAAGAAA GAAAAACAGA GGCACCCTAT
  CTTTGAACCT AAATCAGTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss136029571	ENSMUSSNP3454303	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs46345628					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143971923 () rs orientation: forward

Symbol	Name	Function Class
Rr74711	regulatory region 74711	1164 bp distal
Rr74712	regulatory region 74712	552 bp proximal