rs46346186 SNP Detail

Summary

• ID
  rs46346186
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:55207113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCTGGGCT CTTCTTTCTT
  TGGCCTCCTT ATGCCCAGAA TCTCTCCCTT TTCTGTTTCC TCTGCTCAAG CTGTGTGTTG
  GTTTCCCATC TCTTCTGACT GCATCTGATT GACTGGCCTT TCCTTCTTCC TTCCTTATTT
  TGTTCTCTGT TCTCCCTCCC CTGCTGTTTT TGCTATTGGT AACCAACTCT TCATCCTCAG
  S
  ACAGGGCCCA TGCTCTGGTT GCCTAGCTCA GTGGTCAGAA CACAGAGGGC TGTTGAACAG
  GAGTCTGGCC ACACATGAGT GTGTCTGTAG GTGGGGTTGA GGGGAGACTC AAAGAGATGT
  CTTCCAATCC CATTGTCTTT CAGACCTACA TTCCTAAAGC TACCCCGAGC AGCCCAGCTG
  TGGCAGAGTA TCTCGGGAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52723006	NES15567956	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46346186					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52723006	NES15567956	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:55207113 () rs orientation: forward

Symbol	Name	Function Class
Mhrt	myosin heavy chain associated RNA transcript	within coordinates
Myh7	myosin, heavy polypeptide 7, cardiac muscle, beta	1028 bp downstream
Rr407057	regulatory region 407057	1873 bp distal
Rr492380	regulatory region 492380	851 bp distal
Rr492381	regulatory region 492381	5 bp proximal
Tssr125718	transcription start site region 125718	973 bp downstream
Tssr125719	transcription start site region 125719	881 bp downstream
Tssr125720	transcription start site region 125720	856 bp downstream
Tssr125721	transcription start site region 125721	844 bp downstream
Tssr125722	transcription start site region 125722	396 bp downstream
Tssr125723	transcription start site region 125723	354 bp downstream
Tssr125724	transcription start site region 125724	314 bp downstream
Tssr125725	transcription start site region 125725	511 bp upstream
Tssr125726	transcription start site region 125726	536 bp upstream
Tssr125727	transcription start site region 125727	569 bp upstream
Tssr125728	transcription start site region 125728	1377 bp upstream
Tssr128746	transcription start site region 128746	1681 bp upstream
Tssr128747	transcription start site region 128747	1657 bp upstream
Tssr128748	transcription start site region 128748	1613 bp upstream
Tssr128749	transcription start site region 128749	1582 bp upstream
Tssr128750	transcription start site region 128750	1560 bp upstream
Tssr128751	transcription start site region 128751	1554 bp upstream
Tssr128752	transcription start site region 128752	1495 bp upstream
Tssr128753	transcription start site region 128753	1296 bp upstream
Tssr128754	transcription start site region 128754	1226 bp upstream
Tssr128755	transcription start site region 128755	1059 bp downstream
Tssr128756	transcription start site region 128756	1076 bp downstream