rs46353937 SNP Detail

Summary

• ID
  rs46353937
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3668893 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              AAAGAATTCT GGAATTACAT
  ATAGCACGAT ACTAATAATA GTTGACTCAA TGGAGAAGGG AGGGGGATGA GTGGGGAAAC
  ACACCTGCAA CATAAATATA TCATCAAGGG GGCTTCAGCC TTCTTTATAT CATGTTCACA
  TTTTACGTAG AGAAGAGTTT GTAATCTCTG ACTTATTTCA AGACACTGCT CTATAGGCCC
  W
  CCAGTTATTC TCACCCCCAA CAAGGAGTAC AGCTGAATAA TTCAGATTTT GTACGACACA
  TGTATGCATA TATGTGTCCT GAACAGAGTT TTATATCAGT AACAAGAGAA AGCAGCCTGC
  TGAAGCTGGT TATAATTAGA AGCATTATGC TCTGTGTGGA GGCCTTCCAC AAATAGGTAA
  CAATACAGTC CCTTCCTCCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss146748664	ENSMUSSNP6230842	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T		A
ss323242490	CHEV_10_6627648	CHEVERUD	SCREENING_POP	f	SNP				A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs46353937					SNP	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3668893 () rs orientation: reverse

Symbol	Name	Function Class
A330032P22Rik	RIKEN cDNA A330032P22 gene	within coordinates
Gm56946	predicted gene, 56946	within coordinates
Rr426848	regulatory region 426848	720 bp distal
Rr426849	regulatory region 426849	72 bp distal
Tssr92213	transcription start site region 92213	725 bp downstream