rs46354475 SNP Detail

Summary

• ID
  rs46354475
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:53019598 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAATGGGGG GGCAGACTTG
  ATGGACACAT ACATACTATA TCTACATATA TATATATATA TATATATATA TACACACACA
  CATTCCCGAA CATCTCAAAC AACAATAAAA TGAATACAAT TTACAACAAA GCAGAGGCTG
  GCTAGGTAGC TGAGGCTGGC CTAGCACTCC CTGTGTGTGC CGGCTGAGTT CCAAGATTAC
  A
  GATGTATATA TATATCACCC TGGCTTTGGG AAGCACACGC TTCTCAAACC AATTCTATTC
  TTTCAAAGGT CCTTGAGCAA TGACAATTGA CTTTGGTTAG CACGAGGAAA AGAGGACTCG
  TGGAAGGTCC TCAGGACCGA GGAGGGAGCT TCTGAAGTGA CAGAGGTCAT GGGAGGCCCA
  GAGTACCCCG TAGACCTCTG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss149005027	ENSMUSSNP5969370	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46354475					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:53019598 () rs orientation: forward

Symbol	Name	Function Class
Auh	AU RNA binding protein/enoyl-coenzyme A hydratase	within coordinates
Rr284124	regulatory region 284124	4 bp proximal