rs46358950 SNP Detail

Summary

• ID
  rs46358950
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60870349 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATCCCCA GTGGTGGTGA
  GTTAGAGTGA CATATTTAGG GGTTTATACA AACAGTCCAA AGCCACTGGT GGGCTGGTGC
  TCCAGCTGCT GAAGGGCTAG TCCCTGAGGA CTCTACCTGA ATAAAGCGAG AGGCCCTCAG
  CCTGAGATCC GTGACACTCT CTCGGAACAA ATGCTCGTGA ACAAGTAAGT ACTTTTTAGC
  M
  ACAATCCGAT GAGCAGGACC CTAAAGTTCA AAGTCAGGCC CATCCATCCC TACCTCTTTC
  AACCTAAGAT GGACCCTCTG AGTTGCCTCC CAAGCAACTG CGGGACCTCT GGCTGAGAGC
  CAAGGGATTT CTTCTTGGGT GGAAGGGAGA GGCAGGAAAA GAGCCCTTCT GCTGCAGGGA
  CCTGGTAGAT CAATCTGAAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52344281	NES15283552	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46358950					SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52344281	NES15283552	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60870349 () rs orientation: forward

Symbol	Name	Function Class
Gm20610	predicted gene 20610	within coordinates
Gm20611	predicted gene 20611	within coordinates