rs46359913 SNP Detail

Summary

• ID
  rs46359913
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:70418762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATAAAATGG TTTGTTTTAT GTGCATTGTT GTTCTGCCTG
  CATGTATGTG TGAGGGTGCC AGATTATTGA AATTTGAGTT ACAGACAGTT GTGAGTTGCC
  M
  TGTGGGTGCT GGGAATTGAA ACCAGGCCTT TGAAAGAGCA GCCAGTGCTC TTAACCACTG
  AGCCATCTCT CCAGCCCCTT GTTCTTGTTT TTTTTTTTT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss132372404	ENSMUSSNP3244879	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	A
ss323735989	CHEV_11_70341438	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46359913					SNP	C	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:70418762 () rs orientation: forward

Symbol	Name	Function Class
Psmb6	proteasome (prosome, macropain) subunit, beta type 6	78 bp downstream
Tssr102730	transcription start site region 102730	1961 bp downstream
Tssr102731	transcription start site region 102731	1902 bp downstream
Tssr102732	transcription start site region 102732	978 bp upstream