rs46360514 SNP Detail

Summary

• ID
  rs46360514
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:159116275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTGCTTTA GAATAAAGGG
  CTGAAAATAG ACACACATCT GACTCATCAA ATGGTCATAT AGGTTTACAA GCTAGAGCAA
  ATCTGTATTT GGCAAATTTA TCAGCAAGCA AAGCATTTGA ATTTTCTTAC TTTAACTTTT
  TTTTAATGAA AAAAGAAACC CAGAAATTTC CTCCCTTTCC TTCCTTTCAT GACATAAATC
  W
  TGGAAAACAT TGACCACTTT CATGGGAAAA AATCCTGATC ATATTTATTC TTTGCTCAGA
  ACAGGGTTTA AATAAAATGG CCCATCAGAA CCCATTGCTT CTTCTCTCCT CACATTTGAC
  CTGGGGAAAC ATTACTTACT TGGTTAGTGG AGATGGAGTT GAGAAAAACA AACCTACTTT
  CATTCTTTTT AATAGCTGAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss134520453	ENSMUSSNP6936003	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs46360514					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:159116275 () rs orientation: forward

Symbol	Name	Function Class
Gm39548	predicted gene, 39548	within coordinates