rs46365850 SNP Detail

Summary

• ID
  rs46365850
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26493849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCA ATCCCTAGCA CTTGAGAGGG
  Y
  GAGGTTAGGG CAGAGGTATC ATGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss137438994	ENSMUSSNP1827890	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss323950903	CHEV_12_27128715	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs46365850					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26493849 () rs orientation: forward

Symbol	Name	Function Class
Rr464136	regulatory region 464136	272 bp proximal
Rsad2	radical S-adenosyl methionine domain containing 2	within coordinates
Tssr112998	transcription start site region 112998	97 bp downstream
Tssr112999	transcription start site region 112999	32 bp downstream
Tssr113000	transcription start site region 113000	62 bp upstream
Tssr113001	transcription start site region 113001	536 bp upstream
Tssr113002	transcription start site region 113002	560 bp upstream
Tssr113003	transcription start site region 113003	635 bp upstream
Tssr113004	transcription start site region 113004	695 bp upstream
Tssr113005	transcription start site region 113005	721 bp upstream
Tssr113006	transcription start site region 113006	1084 bp upstream
Tssr113007	transcription start site region 113007	1168 bp upstream
Tssr113008	transcription start site region 113008	1336 bp upstream
Tssr113009	transcription start site region 113009	1354 bp upstream
Tssr113010	transcription start site region 113010	1504 bp upstream
Tssr115902	transcription start site region 115902	980 bp upstream
Tssr115903	transcription start site region 115903	650 bp upstream
Tssr115904	transcription start site region 115904	626 bp upstream
Tssr115905	transcription start site region 115905	328 bp upstream
Tssr115906	transcription start site region 115906	208 bp upstream
Tssr115907	transcription start site region 115907	149 bp upstream
Tssr115908	transcription start site region 115908	105 bp upstream
Tssr115909	transcription start site region 115909	21 bp upstream
Tssr115910	transcription start site region 115910	22 bp downstream
Tssr115911	transcription start site region 115911	72 bp downstream
Tssr115912	transcription start site region 115912	86 bp downstream
Tssr115913	transcription start site region 115913	121 bp downstream
Tssr115914	transcription start site region 115914	173 bp downstream
Tssr115915	transcription start site region 115915	202 bp downstream
Tssr115916	transcription start site region 115916	259 bp downstream
Tssr115917	transcription start site region 115917	305 bp downstream
Tssr115918	transcription start site region 115918	324 bp downstream
Tssr115919	transcription start site region 115919	351 bp downstream
Tssr115920	transcription start site region 115920	378 bp downstream
Tssr115921	transcription start site region 115921	683 bp downstream
Tssr115922	transcription start site region 115922	779 bp downstream
Tssr115923	transcription start site region 115923	862 bp downstream
Tssr115924	transcription start site region 115924	933 bp downstream
Tssr115925	transcription start site region 115925	948 bp downstream
Tssr115926	transcription start site region 115926	1297 bp downstream
Tssr115927	transcription start site region 115927	1341 bp downstream