rs46365852 SNP Detail

Summary

• ID
  rs46365852
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:184584133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AAAACAGACA CTTAGCCGTG AGGATCAGTG AGCAACTCCA
  TGGAGGCAGG GGAAGTGCTC CTGGGGCACA CACACACACA CACACACACA CACACACACA
  C
  TAAGGGACAG CTAGCCTGTC CTCCCGGCCT GCCTCAGCGG ACGGACGTCC TGTTTCTTTG
  CACTACGGAC TCGGTAGTTC TCTCGAGGTT GTAAAGATTT C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss146419857	ENSMUSSNP1249298	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs46365852					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:184584133 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1164	CpG island 1164	8 bp proximal
Gm34451	predicted gene, 34451	within coordinates
Rr372580	regulatory region 372580	1906 bp downstream
Rr396695	regulatory region 396695	417 bp upstream
Rr425307	regulatory region 425307	within coordinates
Rr425308	regulatory region 425308	1308 bp proximal