rs46366026 SNP Detail

Summary

• ID
  rs46366026
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:37560649 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCCTCCT AGGGGAAGAG
  GACATGTGTT CCAAAAGGCT GAATTCCACC TTTCTGAAAG TCAGGACACT ACGATTTATC
  GCCATTAACG AACAATTAAG GGGACAAACC TCTGGACTGG TCACTGGGTC GAGTTTGGTA
  ACCCAGGGGG TTAATGACCT CAGGGTCATC CCAGGAAGTA GACCAGATCT GGGTGATCAT
  A
  AGCCTCAGCA TAGCCTGGCA GAGCTGCCTA GCACTGCTCA TGGCAAGAGG AAGCCAGGCC
  ATCTTCCATG CCTTATAAGC AGTGATGGCA AGGACCATGC CTCTGACCCT AATCCAAGCT
  TGTCAATAGT CTCCAAAACA ATCTTTCAGG GTGAATCTGT GGTCGAAGGC CCAGAGGACA
  GGCAGACATT TTTTGGGCCC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144489818	ENSMUSSNP3035786	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46366026					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:37560649 () rs orientation: forward

Symbol	Name	Function Class
Ccnq-ps4	cyclin Q, pseudogene 4	1208 bp upstream
Gm18267	predicted gene, 18267	within coordinates
Gm63788	predicted gene, 63788	1774 bp downstream
Gm64931	predicted gene, 64931	1473 bp upstream