rs46367186 SNP Detail

Summary

• ID
  rs46367186
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:111830915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGT GACCTCAAAA CTGTGTTGGT
  A
  AGCTTTTAGG ACTATTCCTC CCTTT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147213620	ENSMUSSNP3507909	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss321263745	CHEV_4_111646323	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46367186					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:111830915 () rs orientation: forward

Symbol	Name	Function Class
Skint7	selection and upkeep of intraepithelial T cells 7	within coordinates
Tssr38394	transcription start site region 38394	864 bp downstream
Tssr38395	transcription start site region 38395	772 bp downstream
Tssr38396	transcription start site region 38396	646 bp downstream