rs46368026 SNP Detail

Summary

• ID
  rs46368026
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129471588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTCTGCCC TCCTCAGATT
  ATAACTGACA GCAGGGTCGG TTTCTGCTTT TTACTTGACT GTCTCTTCTC TTTAGGGCAG
  TGGTTCTCAG CCTTCCTAAT GCTGGGACCC GTTAATACAG CTCATTTCCT CATGCTGTGA
  TGACTCCCAA GCATAAAATT ATTTTCATTG CTACTTTGTA ACCGTAATCT TGCCACTGCT
  R
  CGACTTTTAA ATAATTTTAA ATATAAATAT CTGATATACT GGATATCTGA TATGCAACCT
  GTCTAAAAGT GCTTTTGGAT GCCCAAAGGG GTCGAGACCC ACAGATTGAG AACCTGTGCT
  CTACGGTCTA CTTCTCCAGA TTTGGCTCTG CAAATAAGAT AGCGAGCAAC TGAATTCCTG
  GTTCCGTTGT CCTAGGGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147442922	ENSMUSSNP4193925	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46368026					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129471588 () rs orientation: forward

Symbol	Name	Function Class
Fam167b	family with sequence similarity 167, member B	Intron
Rr600279	regulatory region 600279	1949 bp distal
Rr600280	regulatory region 600280	1836 bp distal
Rr600281	regulatory region 600281	713 bp distal
Rr600282	regulatory region 600282	476 bp distal
Rr600283	regulatory region 600283	744 bp proximal
Tssr43532	transcription start site region 43532	717 bp downstream
Tssr43533	transcription start site region 43533	726 bp downstream
Tssr43534	transcription start site region 43534	740 bp downstream