rs46372363 SNP Detail

Summary

• ID
  rs46372363
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:163436673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCAAGCCC TTGGAACCCC
  CTGTCTCTGC CTCCACTGCA CAGGGTTACA GCTGCACACT ACCTCGCCTG GCTTTTGTTT
  GTTATGTTTG TTGTATCGGT GTTTTGCTTG CATGAGTGTC TGTGCACTGT GCCCATGGAG
  GCCCAGAGAG GACATCAGAG CCGCTAAAAC TGGAGTTACA GACAGTTGTG AGCTCCACAT
  R
  GGTGGTGGGA AGGGAACCTG TATCTTCTGT ATGAGCAACA CGTGCTCTTA ATTGTAGAAC
  TCTCTCTCCA ACCCTCGATT TTTGTTTTGT TTCGTTTCAT TTTGTATTGT ATTGTACTAT
  GTAGGTGCTG GAAATGCAAA CTCAGGTCTT CATGTTGGCA TAGTGAGCAC TTAGCCAATG
  GCGGCATCTT CCCAGCCCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148206280	ENSMUSSNP5122653	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46372363					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:163436673 () rs orientation: forward

Symbol	Name	Function Class
Rr374198	regulatory region 374198	283 bp downstream
Rr569427	regulatory region 569427	397 bp distal
Rr569428	regulatory region 569428	277 bp proximal