rs46372891 SNP Detail

Summary

• ID
  rs46372891
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127764878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGTTTTC TCTTCTCTGG
  TGTTCGCTGG GCTGTACAAC CATTATCGGC CACTGGGTGG CGCTGAAGCG CCAGGCAAAT
  TATTTGCTGT GGTCAGGCCA TCATTTTGAC TTTTAGCCAA CACTAAATGT TACAGGGAAA
  GGTTACTGAC TTCTGCAGTC TTTGAGATAC AATATTTTAT TATCTGTCCA TTTCCCTTGA
  R
  TTTTTACTTG ACAAAGTCTG AAGGCATTTT CTTTTTGGTT TTAGATTAGA GATATTAATT
  TATTTGTACA TTTTTGTGAC AAGTGGAGTG TTGAAAAAAA AAAAAAACCA TACTGTTAAC
  TACGTGGTGA GGTGCATTCT ATACAACCTT AATAACTAGT GACATGGGTT AAACTTGGGG
  ATGCGGGGTA CTGTTCTCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320958806	CHEV_3_127674147	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46372891					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127764878 () rs orientation: forward

Symbol	Name	Function Class
Gm35667	predicted gene, 35667	within coordinates
Rr52	regulatory region 52	within coordinates
Rr584913	regulatory region 584913	18 bp distal
Rr584914	regulatory region 584914	134 bp distal