rs46379285 SNP Detail

Summary

• ID
  rs46379285
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107342726 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCATGAG CACTGCACAC
  ATCTCAGGCG AAACGCATGC GTGCTGTTTG TAAATTATTC CCCTAACCCC TTGGTTAAAA
  GAACAGGGCC TCGGGCTGGA GAGATGGCTC AGCGGTTAAG AGTGGTAAAG ATGACTGCTC
  TTCCAGAGGT CCTGAGTTCA ATTCCCAGCA ACCACGGGGT GGCTCACAAC CCTCTGTAAT
  R
  GGATCCAATA CCTTCTTCTG GTGTGTCTGA AGACAGCTGC AGTGTACTCA TATACATTAA
  ATAAATAAAT AAATAAATAA ATAAATAAAT CTTTTAAGAA AAAAGGACAG GGTCCTGCTG
  GGAGGAGGTT AACTCACAAC ACTTCTTTTG AAATGTGAAG GCATTAAACC AAACTGCTGC
  TGTTGGTGGA GGTTTCTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135583993	ENSMUSSNP1649343	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46379285					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107342726 () rs orientation: forward

Symbol	Name	Function Class
Rr582971	regulatory region 582971	1316 bp distal
Rr582972	regulatory region 582972	1285 bp distal
Rr582973	regulatory region 582973	1055 bp proximal