rs46386182 SNP Detail

Summary

• ID
  rs46386182
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103870403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TTATGGTTTA ATACTTGTGT CTTCATGGCA CCTCGTTAGT
  TTCCACAGTA AAATGATATT TGGTTGCAGG AAAGGCTCCT GCATCTGGTA CATGGACAAG
  W
  GAGTTGTTTA GTTCTAACCA CAAAGAAGAC ATGGTCTCTA AAGAAAACTC TCTGGCTTCT
  GGTTTTCAGC AAAAGAGGAA ACACAGCATT CTCTGATCCA G                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss135565666	ENSMUSSNP6809397	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs46386182					SNP	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103870403 () rs orientation: forward

Symbol	Name	Function Class
Phtf1os	putative homeodomain transcription factor 1, opposite strand	1449 bp downstream
Rsbn1	rosbin, round spermatid basic protein 1	within coordinates