rs46387791 SNP Detail

Summary

• ID
  rs46387791
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67384579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTTTGATT CGTTATCATG
  ATGGGAGCAT GGCAGCACAT AGGCACACAA GATACTAGAG AAGTAACAGA GTTCTGCATC
  TGCATCTGCA GACAGCAGGA AGAGAGAGAC TCTGGGCCCG GCTTTGGCCT TTGAAACCTT
  AAAGCCCCTC CCCCAGGGAC ATACTTCCTC TAGCTAGGCC ACACTTCCTA ATCCTTTCAA
  W
  TACTTACACT CCCTGGTGAC CAGGCGTTCA AATCTGTGAG CCTATAGGGG CTGTTCTCAT
  TCAAACCTCC GTGTTTACTG TCTAAAAATG TATCATTTAT GTATGAAAAG CTGAAACTGA
  GTAGAACAAA AATCCTGGTG CTACTTTTGA TATATCCTGA AATTCCAAAG GTTGTGGAGC
  CATTCAGTGA GTGTGAGGCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss135257889	ENSMUSSNP6581539	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs46387791					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67384579 () rs orientation: forward

Symbol	Name	Function Class
Gm42568	predicted gene 42568	within coordinates
Rarres1	retinoic acid receptor responder (tazarotene induced) 1	1726 bp downstream