rs46389923 SNP Detail

Summary

• ID
  rs46389923
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:174500727 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T AACACCCCCA AACCAAGGCT GTGGGTTGTT TCTTCTGCCA
  ACTCCCATCT GCCTGTCTTT GAATACCTCT AGTGGAGGCT TCCTCTCTTC TCTTCACTTT
  T
  CAGCACCAGG ATTCTCTTTT CATTTCTCTT TAAGATTTTC TGTTTCTTTA TTGGTGCTGT
  CATTTTGACT GCACATCAAT TTTTTTCCAT CTCTTTCTTT G                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146292448	ENSMUSSNP6149925	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46389923					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:174500727 () rs orientation: forward

Symbol	Name	Function Class
Fmn2	formin 2	Intron
Rr423785	regulatory region 423785	1590 bp proximal
Rr423786	regulatory region 423786	1663 bp proximal