rs46392740 SNP Detail

Summary

• ID
  rs46392740
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69017299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTTATTCTG AGACTTGAGG AACATGGAAG ATGAGGTACA
  GTTCCACAAA AGGAAGCTCA CTCTGGAAGC TGCATACTCC AAATCTTGGA AGAAAACAAA
  W
  ACCTATGCTG AGTAAGAAGA TGACAGCAGT GACTGCTCAA AGACTGTGTA GGGTGATGCC
  TGTTCTACTT GATGTGAAAG TAAAATTGAT AGCTAGTATT                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	KK/HlJ	PWD/PhJ	WSB/EiJ
ss52647683	NES15469369	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	KK/HlJ	PWD/PhJ	WSB/EiJ
rs46392740					SNP	A	A	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52647683	NES15469369	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69017299 () rs orientation: forward

Symbol	Name	Function Class
Adcy2	adenylate cyclase 2	within coordinates
Rr277015	regulatory region 277015	499 bp distal
Rr280122	regulatory region 280122	1075 bp proximal