rs46393818 SNP Detail

Summary

• ID
  rs46393818
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:27482347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTTTATAA CCCGCAGCGT
  GACGTTTCAG CACCTGATAT GGCGTGACAG CTCCCGATTC ATTGCTTGCC CATCACCCCA
  CTATTACACC CTGAGAATGG GAGTGACTAG GAGTGAATTC AGTCTCGCAC CTGCGTACAA
  GGCTTGTTTA CTAGTTTGGC ACAGCGGAGG CCCGCGCCAT CTTATAATGG CGATTGCTCG
  C
  GGCACACACG GCTCTCCTCA GAGATTACTG GCAGCACGCA CGAGATTGCT CGCAGCACGT
  ACAGGCTCTC CACATATTGG TGACAGTGAA GCCTGCTTTT AGAAAGGGAT CCCAGCAGTT
  TTATCTATGA CAACATGGTG AGTTGATCTT CAAGAACAGC AGCAGCAATG GGGTGGAGCC
  AGCCAGAGCA TAGAAAACAA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss148807181	ENSMUSSNP3127151	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs46393818					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:27482347 () rs orientation: forward

Symbol	Name	Function Class
Gm70420	predicted gene, 70420	within coordinates
Rr371030	regulatory region 371030	within coordinates