rs46394751 SNP Detail

Summary

• ID
  rs46394751
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30451471 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATGGGGTCA GCCAGGGGGG CAGTGAAGCA GGGAAGTTTG
  GTCAGGGGTC CCACCATGCT TTTGGTCAGG GTGGGAATGT GGCAGACAAG TTAGGTCATG
  R
  AACCCACCAT GCTTTTGGTC AGGGTGGGAA TGTGGCAGAC AAGTTAGGTC ATGAAACCCA
  CCATGCTTTT GGTCAGGGTG GGAATGTGGC AGACAAGTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148687392	ENSMUSSNP4812787	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46394751					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30451471 () rs orientation: forward

Symbol	Name	Function Class
Rr644909	regulatory region 644909	1867 bp distal
Sbsn	suprabasin	within coordinates
Tmem147os	transmembrane protein 147, opposite strand	within coordinates
Tssr65808	transcription start site region 65808	503 bp downstream
Tssr71856	transcription start site region 71856	111 bp downstream