rs46401994 SNP Detail

Summary

• ID
  rs46401994
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:71780936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTAAGAAAA TGCCCTACAG GCTTGCCTAC AGGCAATCTT
  GATAGAGGCA TTTTCTCAAT TAAGATTCCC ACTTCCTGGT TTATGTCAAG CTGACCCAAA
  S
  GGATGAGGAC AGTAAGGCTT TGAGACTGCT TTGCTGAGGG CTCACATAAC AACACAGCAT
  ACACTGGGTG ACCTAGACAA ACATACCTGT CTCACAGCT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132396237	ENSMUSSNP5681258	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46401994					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71780936 () rs orientation: forward

Symbol	Name	Function Class
Gm46285	predicted gene, 46285	1570 bp upstream