rs46404943 SNP Detail

Summary

• ID
  rs46404943
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87156448 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAG GGAGGGTGAA AGTAGAGGGC
  R
  TAATGGAATG ATGCGGTAAA AAACC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135456754	ENSMUSSNP2596841	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss320831827	CHEV_3_87053063	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46404943					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87156448 () rs orientation: forward

Symbol	Name	Function Class
Fcrl2	Fc receptor like 2	1870 bp downstream
Rr579465	regulatory region 579465	1458 bp distal
Tssr33932	transcription start site region 33932	518 bp downstream