rs46406792 SNP Detail

Summary

• ID
  rs46406792
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156557381 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCCCAGAGG GTACCACTAT GTAGCCTAAA CTCGCCTGGA
  ACTCACAGAG CTCTGCCTAC CTCTGCCTCT CGGGTGCTGA GCCATCTCTC CAGCCCTTCC
  S
  TCCACCTTCA TGTGGGTTCC AGGGATCCAA CTCAGGCCAC CAGACTTGCA ATGGCAAGCT
  CTTTTATGTG ACGAGCCCAT ACCAGCCCCT TCATTTTTA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148081067	ENSMUSSNP3551274	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss320581501	CHEV_2_156541197	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46406792					SNP	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156557381 () rs orientation: forward

Symbol	Name	Function Class
4930405A21Rik	RIKEN cDNA 4930405A21 gene	within coordinates
Dlgap4	DLG associated protein 4	within coordinates
Rr568331	regulatory region 568331	1654 bp proximal