rs46419304 SNP Detail

Summary

• ID
  rs46419304
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111861170 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAAAATGC AAATGAGCTA
  TCCATGATTC ATTATTCAGT ACCACACTCC ATGAAATGAG GATAACAATA AGTGCCTACT
  ACTGCACTAG ATTTTTGTTG AGATAAGTTT TTTTTTCTTA ACTACTGCAA AGTACTCACA
  ATGTCTGGCA TGTAACGAAT GCTTTAATAT ATAATCTATC ACTTTTATTA TCTAATATAC
  S
  GGTACCATTT AAGAAACAAA AATACCCTAA GTTTATCTCT TCAAATTTCC AATTGTCAGT
  TATAGACCTC TTTTTAGTCT ATCTCATTAG CTTCTGTAAA GGAATTTTAA TCCAGCAACA
  TGACTGCTCT GATCACATCC AAAGCCTTCT AGGTCTGTAT GATTTGGCTG AAATGCAGAC
  ACATCAGTAC CACACAAATT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134277782	ENSMUSSNP3723959	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
ss325913363	CHEV_X_110065082	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46419304					SNP	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:111861170 () rs orientation: forward

Symbol	Name	Function Class
Rr2637	regulatory region 2637	1170 bp distal
Rr6449	regulatory region 6449	1418 bp distal