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rs46423974 SNP Detail
Summary
  • ID
    rs46423974
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr1:75555649 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                AAGACTGTTT AATGCTGGGC
    AAAGGGGAAA AATAAAGAGT AGCTTTACTA GGGGCAAGTT ACAAAGTAGG GCTGGACAGA
    GGAAGGCAAA TGGCTTTGGG GATGAGTGCT GTTACAATAG GAGGAGTGCA ACCCCAGTCC
    CGGGCAAGTG GAAACAGAAG CCCAATGTCA CCCTCAGCTA CACAGAGGCC AGCTTAGGCT
    R
    TAGGAAACCT CATCCCAAAC AAACAAATGA ATGGATTAAT GTACATACTC ACGTTTTCCT
    GGCAGGGTTT TGAGGGATAA GCTGCCATGG GTCACAGTAG ACAGACTTAG CTCTGTACCA
    TGTATTGGCT ATGTACTTAG TTCAGCCTGT TTCCATACAC CGTGTAATCA CAGCGTGGCT
    CGGTTTCAGC CTCAATGCCA                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
A/J
DBA/2J
ss144696856 ENSMUSSNP371483 ENSEMBL ENSEMBL_Sanger f SNP A G
SNP Consensus Information
SNP Consensus Type
A/J
DBA/2J
rs46423974 SNP A G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr1:75555649 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm69448 predicted gene, 69448 1000 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/22/2025
MGI 6.24
The Jackson Laboratory

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