rs46430251 SNP Detail

Summary

• ID
  rs46430251
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:35017033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGCCAGGCA TGGCACTACA CACCTTTAAC ACCAGCACCT
  GAGAGGCAGA GGCTGCTAAA ATACTGTGAG TCCAGCCAAG TGGAGCTAGC AAGGCCCTGT
  Y
  CCCCCCCCCC CAAAAAAAAA GTAAAAGGGA AGAAATGCAT TTCTCTTTGT GTAAACTGAA
  CCAATACCCG TAGTATAAGA GCCAAACTCC TGGCTGGGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148806710	ENSMUSSNP7244867	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46430251					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35017033 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18869	CpG island 18869	459 bp proximal
Gpatch1	G patch domain containing 1	within coordinates
Rr645358	regulatory region 645358	820 bp proximal
Rr645359	regulatory region 645359	822 bp proximal
Tssr72030	transcription start site region 72030	800 bp downstream