rs46432332 SNP Detail

Summary

• ID
  rs46432332
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107375110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGGGGCCC TGGGGTGACA
  ATGCCTCATG CCCTCTCCTG GGCCAAGTGA TCCTGACTCA GAGCACTGGC CACTCCAGGA
  CACATGAACT TAAACTGTTC TGAACGTGTG TCAGGACCGG AAGTGACTGC CTGGTATGTG
  TTTAGGTCTG TACAAAGCAG GACTTCTCAT GAGAAATGAC CCGGGGCCCT CCTCCCCTAG
  Y
  TCCCCATAGT TCAGACCTAA GAAGAGGGAC TCAGAGGTGT ACAGAGTCAG GTGTATTACA
  GCCTGCGTGA TCTCACTTCT CTTTTCACAG TGGGCATACT CTAGTTGAGG GAAGGGTAAT
  GTAGTGGTAA GGAAGGGAAG AAGAGCAGTC CCTGCCTGGG AATACTGCAG ATCTGCACGG
  GGATTGGCTC ATAGCCTCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss135584324	ENSMUSSNP5725745	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs46432332					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107375110 () rs orientation: forward

Symbol	Name	Function Class
D3Mit103	DNA segment, Chr 3, Massachusetts Institute of Technology 103	1826 bp proximal
Rr582980	regulatory region 582980	842 bp distal
Rr582981	regulatory region 582981	1007 bp distal
Slc6a17	solute carrier family 6 (neurotransmitter transporter), member 17	within coordinates