rs46432433 SNP Detail

Summary

• ID
  rs46432433
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77829791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCC TGTCCCTTCT CTCCCCACCT
  A
  TTGTGTATGA CATTCAGTTG TAATT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136662640	ENSMUSSNP4371544	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss323014767	CHEV_9_77770316	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46432433					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77829791 () rs orientation: forward

Symbol	Name	Function Class
Elovl5	ELOVL fatty acid elongase 5	within coordinates
Rr683431	regulatory region 683431	571 bp distal
Tssr86221	transcription start site region 86221	1028 bp downstream
Tssr86222	transcription start site region 86222	1009 bp downstream
Tssr86223	transcription start site region 86223	982 bp downstream
Tssr86224	transcription start site region 86224	763 bp downstream
Tssr86225	transcription start site region 86225	590 bp downstream
Tssr86226	transcription start site region 86226	759 bp upstream
Tssr86227	transcription start site region 86227	808 bp upstream
Tssr86228	transcription start site region 86228	1156 bp upstream
Tssr86229	transcription start site region 86229	1203 bp upstream
Tssr86230	transcription start site region 86230	1915 bp upstream