rs46433718 SNP Detail

Summary

• ID
  rs46433718
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183833735 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCGTTAAC TCGGTTGCAT
  CTGGCTAAGC AGCATATGAT CTGCAGCCAG CTCTCTTGGG AAACTGTCTT GATGTCCCAG
  GACACCGAGG TTTCCTTGAT TTTATCAGGG GTGCACCTGC AAGATGCCAG CCCTGCAAAG
  GTCATTTAAG AAGTACTTGC AAGTAGCTAC TCCTCACACT GGGGCTACAC ATGCAAAGTT
  R
  AGAGTTAATT TTGAAGACAT GAAGGGGATC TCCACCGAGG CTGTGGTTAG GGACCCTTCC
  TTTCTCTCTC TCTTTCCACC CCTTTTGCCT ACCCCGTATT AAGATTTCTA TCTTTGGGCT
  TCTTTTGAAG CCCAGGTATA AGTACAGATG TTTTAACATA CTTCCTATAA CAGAAAGAGG
  AGGCCTCAAA CTGGCAAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60352482	NES15853226	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G		A	A	A
ss146417514	ENSMUSSNP3324175	ENSEMBL	ENSEMBL_Sanger	f	SNP		A						A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46433718					SNP	A	A	A	A	A	A	G	A	A	A	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60352482	NES15853226	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183833735 () rs orientation: forward

Symbol	Name	Function Class
Rr425178	regulatory region 425178	within coordinates