rs46435786 SNP Detail

Summary

• ID
  rs46435786
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:48161648 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTACTTGGA GAGTACATTT
  ACAATTTTAC TCAGCACCAA GTATATTTAA CATCTATGAA ACTAGAATCA AACAACTGAG
  TTTAGCCACG GAGCAATTAC AGCTTTACCA TTTACCTGGC GCCTTTAACA GTGATACATG
  TACTATCTAC TATGCTTCCA AAGTCTTGAA AATCCCCAAC AACAGATTTC AAAGCTATTT
  Y
  TTCTTTCACT ACACTGTACT AATGAATAAC TATAAAATAC ATATTTGTTT TAAATCAGAC
  AACTTGAGTG TTCCTTTGCT TACTTGTTAA GGTGTATATA GAAGGCTCTT TCCGTAACTC
  TCCACCTTAC AGACTGAGGC TCCCTAGGAC TCCCCGTTCT CCCAGTGCTG CAACAGATGG
  GCCATCACTG TCGCCCAGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60606901	NES16304516	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46435786					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60606901	NES16304516	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:48161648 () rs orientation: forward

Symbol	Name	Function Class
Cdkn2aip	CDKN2A interacting protein	731 bp downstream
Gm64835	predicted gene, 64835	1686 bp upstream