rs46435889 SNP Detail

Summary

• ID
  rs46435889
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:98590069 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCTTTAT AACGGAGTGC
  CGAAATAGTA AAAATTGAAC CTTGAGCAGA GAGCTTTGTC TTGGTTCCTT CCTTATCTCG
  CGCAGCCCAG CCCCTCTTCT CCTCCAGGTT TCCAAAATGC CTTTCCAGGC TAGAACCCAG
  GTTGTGATCT ACTGGCCAGA CACAACAATT TCTAATTTCA AGGCCAGACT GGTCTACAAA
  K
  TGAGTTCCAG GACAGCCAGG GCTATACAGA GAAACCCTGT CTCGAAAAAA CAAAAACAAA
  AACAAAAAAA AAAAACAAAA ACAAAAAACC AAAAACAATA AAACAAATCA AAAACGAACA
  AATGAGAATA ATACAAAAAC AAGAAAATTA GCCAAAGAAA AACCATAATA ATAAAAAAAA
  TACATGTAGA GATATACATG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss137986006	ENSMUSSNP3871437	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs46435889					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:98590069 () rs orientation: forward

Symbol	Name	Function Class
Rr387680	regulatory region 387680	within coordinates