rs46439691 SNP Detail

Summary

• ID
  rs46439691
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74598429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCCTCAAA AATTCAGAGA
  TCAGCCTGCC TCTGCCTCTG CCTCTGCCGG CACCCCCATC CCCAACACCA TGTCTTTTTA
  ACTACAATGC TGCAGGATAT TTGATCACAC TGTATGTAAA ACACAACATT GTGAACTAGA
  AAACCCTTGT GTGGCTCAGC CCTGGAAGAC ACCATTAATC CAAAGTGGTT CTGTAAAACA
  R
  AATTAACGAA GTGAACCATA GGTCAAGAGG TGGAGTAAGT AACCAGTTGA GAGGGAGAGA
  ACCTAAGGAA TAGAAAGGAG GGCACCGAGT TGAAGGGTGT TTGTATCAGT GGAGTAGGAA
  GGGTCTTTAA ACAAGTCTGG TATTTGTTCT TGGTTTTGAA GATAGTATTC TCTTTTTCTG
  TATGTTACTG CAAGAGGCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss132435357	ENSMUSSNP5438147	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss323749434	CHEV_11_74521105	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46439691					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74598429 () rs orientation: forward

Symbol	Name	Function Class
D11Mit352	DNA Segment, Chr 11 Massachusetts Institute of Technology 352	128 bp distal
Pafah1b1	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	within coordinates
Rr386282	regulatory region 386282	176 bp downstream
Tssr109134	transcription start site region 109134	1973 bp upstream