rs46440579 SNP Detail

Summary

• ID
  rs46440579
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:124413161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ccaggagct gcagtcaatg tgagagttgc
  aaaacaaaca tggttgcact gcaagagcag tatggttctt aacctcagag tcatctctcc
  aaacccCACA TTTTGTGATT TTTAATTGAG ACAATGAACT TAACACTAGT AAAACTCAGA
  Y
  CAAATCTGTT TTCTGCCCTT TTTCATCCTT TCAGAATATC TACGCTAAAA AGAAGCCTGA
  AAGTAATAGA AACATGATTT TTAAAATAGC AATTTAAAAG AGCAGCATTT GCCAGAAAAT
  GAAAAACAGA GAGAGATCTG TCAGAGTACC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss60792938	NES16469153	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T		C	T	T	T
ss319946981	CHEV_1_126382001	CHEVERUD	SCREENING_POP	f	SNP											T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs46440579					SNP	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60792938	NES16469153	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:124413161 () rs orientation: forward

Symbol	Name	Function Class
Dpp10	dipeptidylpeptidase 10	within coordinates
Tssr13333	transcription start site region 13333	252 bp downstream