rs46450713 SNP Detail

Summary

• ID
  rs46450713
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124021096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCATGATGAA CTGTAAACTC
  TTTCACATTT GTGTATTTGA AGAAATAAAA GTCACACAAA ACTCCAATTT CTTGGCCAAT
  TCCCATTCCA GAAAAAGTCA AGATACAAAT GGAGCCATGT TTTTAAATAG TCATAAATTC
  TCTTCCTTTC TTCTACTTTG CGATCCCCTC CAGAAAAGAT CCCTGCAAGA CTTCGCAAGT
  R
  TTATGAAGTG GAGAGTGTTT GCTATCTATC TCTCTGCTCT GTGGAAAACT TACTGTAACA
  GAGTTTATCA CAAACAATCC CCAGGAATAG AAGACACTGT GAGAGTAGGA GAAGCCATCA
  CATACATTTA CTTCCTCATA CTTATTGGAA AAAAAAATAT GGATAGTCTA GTTCAAAGTG
  GGGATGAATC AAATACAGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135782640	ENSMUSSNP3064456	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss320926427	CHEV_3_123930365	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46450713					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124021096 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	1247 bp distal