rs46454870 SNP Detail

Summary

• ID
  rs46454870
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:80564616 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TACAAAGCCC GGTTTTTTGT TTGTTTGTAT TGATTCTTTT
  TTTTTTTTTT TTTTTTTTTT TTTTGAGATA GGGTCTATTT ATGTAGCCTT GGCTGTCCTA
  G
  AATGTGCTAT GAAAACCAGA CTGGCTTCAA ACTTGTAGCA ATCTGGCTGC CTCTGCCTCC
  CTAAAGCTGG GGTTCAAGGC AGCCCTCTTC TGCTGTTCAA T                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss136688849	ENSMUSSNP1622040	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs46454870					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:80564616 () rs orientation: forward

Symbol	Name	Function Class
Rr683772	regulatory region 683772	315 bp distal
Rr683773	regulatory region 683773	437 bp proximal
Tssr86335	transcription start site region 86335	650 bp downstream