rs46456278 SNP Detail

Summary

• ID
  rs46456278
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:59377018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TCTGCAGGCA GCTTAAACCT CAAGAAAGCT ACTCATTAGG
  ATCGTGGGGA GCTGTTAATT GCCCTGTCCA GCCAAGACAC AGTGTGGCCG CGCCAGCCTG
  Y
  TGAACAATAA TGAAGTCTGT AGAAGCTGCA GACCCAGCTC GGGCTGCCTA GGATCCCTCC
  TGCCTTCTCT TCATTCTCTC ACCACAGACA CTATGCCCCC T                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146571958	ENSMUSSNP1449710	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46456278					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:59377018 () rs orientation: forward

Symbol	Name	Function Class
Gm33756	predicted gene, 33756	877 bp upstream
Rr370546	regulatory region 370546	637 bp upstream