TTGCA GAGCAGACCG CTGGACCTCT Y GCCTAGTCCT TTAAGAACAG GGAAC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|
ss148216381 | ENSMUSSNP2661541 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | ||
ss325030602 | CHEV_15_80089186 | CHEVERUD | SCREENING_POP | f | SNP | T | C | |
SNP Consensus Information | ||||||||
SNP | Consensus Type | A/J |
LG/J |
SM/J |
||||
rs46460628 | SNP | T | T | C |
Location: Chr15:80142957 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Atf4 | activating transcription factor 4 | 1215 bp downstream | ||||||
Rps19bp1 | ribosomal protein S19 binding protein 1 | 1858 bp downstream | ||||||
Rr505934 | regulatory region 505934 | 892 bp distal | ||||||
Tssr132205 | transcription start site region 132205 | 1836 bp downstream | ||||||
Tssr132206 | transcription start site region 132206 | 1621 bp downstream | ||||||
Tssr132207 | transcription start site region 132207 | 1570 bp downstream | ||||||
Tssr135434 | transcription start site region 135434 | 1215 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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