rs46462822 SNP Detail

Summary

• ID
  rs46462822
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124020042 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCACTGT GGGCACTGCA
  CACATGCAGT GCACAGACAT ACACGCAGGC AATGCTCGTA TTACACATAG AATAAAATAA
  ACCTAAAATA GAAGAAAATT ACAAAGAATA TAGCTTTAGT TTTCCCATAA CTTTACCACA
  AAATAATAAG TTTAAATCAC ATCTTCATGA ACAAATACTT TCTTCTCAAA CAAAAAGTCA
  R
  CATCTATCAT GATGAATTTT GAATCATACT TGTGTTGGAG ATAAGAATAT TAGCTCTGAT
  ACAAATATTG ATTACTCGAG GTCAACTTTA AGAAATTACT AACAATTCTT GCTAACATAC
  AAGAACGTGG ACTTGCAGGA TTTAGAGGCA CACCTAGCCT ATCATCATTT ATTTTTGTGC
  TTGAAACAAA CATAAAATCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926413	CHEV_3_123929311	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46462822					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124020042 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	193 bp distal