rs46465245 SNP Detail

Summary

• ID
  rs46465245
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172695250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGCCCATC GATAAAATGG
  GATTGATAGG GGCCTGGGCA GATGGCTTAG TCGTAAAGTT TCTACAATAC AAGCATGTAG
  GTAGGAGCTC TGATTCCCAC AACCTACATA GAGAGCCTGG CATGAAGCAG TCGCCTGAGA
  CCCCTGTGCT GGAGAAGCAG AGAGGGGTGA ACTCGTGGAA CTCAGTGGCT GCTCGGTCTC
  R
  CAACTGGTGA GCTCCAGGCT CAGTGACAGA ACCCGCCTCA AAGAACAAGA TGGAGGGAGA
  ACAGAGAGGA AGCTCGGAGG CAGAGCTCTG GGTGCTCATC CAGAGTGTCT GGGTTCAGTG
  CCAGCATGCA CACGGAGGGT CTGGACCACG GAGGGTCTGG ACCACGGAGG ATCTCAACTG
  ACCTCACTCC GGTTCCAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148324235	ENSMUSSNP3343035	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320620531	CHEV_2_172678958	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46465245					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172695250 () rs orientation: forward

Symbol	Name	Function Class
Gm36254	predicted gene, 36254	within coordinates
Rr571755	regulatory region 571755	675 bp proximal
Rr571756	regulatory region 571756	900 bp proximal