rs46466491 SNP Detail

Summary

• ID
  rs46466491
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:14721868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAGCTA ACTCCCCACA
  AGGCTCAGGG CGAGCAGCTC TGGGAGTGAG CAGCTGGCAA CCAGCTTGTC TGCTGTTGTC
  AGATGCTGTG AAGAGGAGTC TTGCCCAGCC AGGCCACATC CTCAGCACCA CAGCCCTGCT
  GAGTTCCAGG AACAAACTTC TCTGTAGACC AAGGCAAACA AAGATCCAGA CCCCTCCAGC
  R
  CTGGACTTGG CCTGCTGTGT AGAACACTTC AAATGTGGAA AATACACAAG GCCAGATGGT
  TAAGTTACCA CCACAGGCCA CTGCTTCAAC AATTTGGGGG TGGTTTGCAT TTTAACTTTG
  ATTTTAAAAT GAGGTTTTAA AGTACTGATA AACTCTTCAC TTTTGGAGAC TCACTCAAGG
  ACATCATGGT TTCCTTGGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60541028	NES16560701	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46466491					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60541028	NES16560701	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:14721868 () rs orientation: forward

Symbol	Name	Function Class
Gm34916	predicted gene, 34916	1846 bp downstream