rs46470333 SNP Detail

Summary

• ID
  rs46470333
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:18478012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACGGACTGA CTTTAAACAA
  GCCTTAGGAA TCAGAAAGAA AGCTTTAAAT CATGTAAATT TCATATACAA AAATTCATTC
  ATAAATTGTA TATCTATTTT AAAATTAATG AGTAGTTTTA AAATGGAATT GTCATGAAGA
  CTATAATTTC AATGCAGAAA ATACATTCTC AGTAGGAGGG TAAATTTGGC ATGTTCTTAG
  R
  ACTCAAATAA AGTACTCAAA GAATGTAAAG TAAGAAAAAA AAATCACCTG GAAATTCAGT
  ATACCGCTCT CATGCCAATC ATGGTTTTAG AGTTAAAGAA AGAAAATAAC ATGATCAAAG
  TCCATATAAT TAAACAGTTA ATATTAGTGA AAAGGAACAT ACCAAAGTCT GTCCAACTGA
  GGCTTTAGGA CTTAAAAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60375950	NES15879753	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	FVB/NJ	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46470333					SNP	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60375950	NES15879753	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:18478012 () rs orientation: forward

Symbol	Name	Function Class
Gm30667	predicted gene, 30667	within coordinates
Gm65503	predicted gene, 65503	within coordinates
Rr573897	regulatory region 573897	1432 bp distal